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Trans-eQTLs across different cancer types

In trans-eQTL analysis, we identified 231,210 eQTL−gene pairs at FDR < 0.05 in 33 cancer types for users to search or browse.

     

e.g., "PRAD"
e.g., "rs7231881"
e.g., "SMAD4"


     

Cancer type
SNP ID
SNP position (hg19)
Alleles (A/a)
Gene symbol
Gene position (hg19)
Beta
t-stat
p-valule
Display
BLCA rs112669031 chr5:108067694 T/G FAM13AOS chr4:89630940-89651254:+ 0.4 6.07 3.07E-9 Box Plot
BLCA rs112709458 chr11:23196765 A/G CT47A9 chrX:120077415-120080737:- 0.2 6.15 1.98E-9 Box Plot
BLCA rs112745751 chr4:13313940 A/ACT ITGA4 chr2:182321929-182400914:+ 0.47 6.21 1.35E-9 Box Plot
BLCA rs112752273 chr5:99617713 G/A CT47A9 chrX:120077415-120080737:- 0.23 7.03 9.63E-12 Box Plot
BLCA rs112784664 chr16:87456133 G/C MAP1LC3B2 chr12:116985910-117014253:+ 0.68 6.04 3.67E-9 Box Plot
BLCA rs112788380 chr11:77662362 G/T INTS4L1 chr7:64601603-64694600:+ 0.5 7.09 6.58E-12 Box Plot
BLCA rs1128287 chr5:176728458 G/T LOC388955 chr2:63849182-63850159:- 0.53 10.39 1.94E-22 Box Plot
BLCA rs112963128 chr9:203761 C/T KRTAP3-3 chr17:39149682-39150385:- 0.23 6.05 3.39E-9 Box Plot
BLCA rs11298651 chr4:163963591 CA/C KRTAP13-1 chr21:31768392-31769140:+ 0.19 6.17 1.71E-9 Box Plot
BLCA rs113203411 chr3:129999684 A/AT GRXCR1 chr4:42895284-43032675:+ 0.28 6.78 4.59E-11 Box Plot
BLCA rs11334985 chr6:26399737 AT/A ZNF322B chr9:99957633-99961910:- -0.41 -6.66 9.67E-11 Box Plot
BLCA rs113414124 chr11:10181025 C/A C17orf67 chr17:54869274-54916134:- 0.67 6.1 2.55E-9 Box Plot
BLCA rs113443925 chr1:47865940 C/CATT CT47A9 chrX:120077415-120080737:- 0.16 6.15 1.94E-9 Box Plot
BLCA rs11350120 chr6:26615346 TA/T ZNF322B chr9:99957633-99961910:- 0.53 9.71 4.6E-20 Box Plot
BLCA rs113505892 chr11:77644180 G/A INTS4L1 chr7:64601603-64694600:+ 0.49 6.84 3.23E-11 Box Plot